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= MiToBo - A <span style="color:#CC0000">m</span>icroscope <span style="color:#CC0000">i</span>mage analysis <span style="color:#CC0000">to</span>ol<span style="color:#CC0000">bo</span>x = | |||
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'''What is MiToBo?'''<br> | |||
The Microscope Image Analysis Toolbox MiToBo is an extension for the widely used image processing application [http://rsbweb.nih.gov/ij/ ImageJ] and its new release [http://developer.imagej.net/ ImageJ 2.0].<br /> | The Microscope Image Analysis Toolbox MiToBo is an extension for the widely used image processing application [http://rsbweb.nih.gov/ij/ ImageJ] and its new release [http://developer.imagej.net/ ImageJ 2.0].<br /> | ||
MiToBo ships with a set of operators ready to be used as plugins in ImageJ. They focus on the analysis of biomedical images acquired by various | MiToBo ships with a set of operators ready to be used as plugins in ImageJ. They focus on the analysis of biomedical images acquired by various | ||
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Furthermore, MiToBo offers a user- and programmer friendly framework for developing algorithms that have properties not available in ImageJ, <br /> | Furthermore, MiToBo offers a user- and programmer friendly framework for developing algorithms that have properties not available in ImageJ, <br /> | ||
however, still provides full compatibility to all ImageJ features. <br /> | however, still provides full compatibility to all ImageJ features. <br /> | ||
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MiToBo completely separates the implementation of image processing algorithms from potential user interfaces.<br /> | MiToBo completely separates the implementation of image processing algorithms from potential user interfaces.<br /> | ||
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MiToBo takes full advantage of Alida's features, hence, provides a framework for implementing image analysis algorithms allowing for automatic documentation and automatic user interface generation, and includes the graphical programming editor Grappa for user-friendly design of more complex processing pipelines. | MiToBo takes full advantage of Alida's features, hence, provides a framework for implementing image analysis algorithms allowing for automatic documentation and automatic user interface generation, and includes the graphical programming editor Grappa for user-friendly design of more complex processing pipelines. | ||
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'''Visit MiToBo also at...'''<br> | |||
{| | |||
|style="text-align:center;width:10%"|[[file:Imagej-128.png|90px|link=http://imagej.net/MiToBo]] | |||
|style="text-align:center;width:10%"|[[file:logo.png|90px|link=http://imagejdocu.tudor.lu/doku.php?id=plugin:collections:mitobo_-_a_microscope_image_analysis_toolbox:start]] | |||
|style="text-align:center;width:10%"|[[file:logo-blue.png|90px|link=https://omictools.com/microscope-image-analysis-toolbox-tool]] | |||
|style="text-align:center;width:10%"|[[file:Git.png|90px|link=https://github.com/mitobo-hub]] | |||
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|style="text-align:center;width:10%"|[http://imagej.net/MiToBo ImageJ.net] | |||
|style="text-align:center;width:10%"|[http://imagejdocu.tudor.lu/doku.php?id=plugin:collections:mitobo_-_a_microscope_image_analysis_toolbox:start ImageJ Docu Wiki] | |||
|style="text-align:center;width:10%"|[https://omictools.com/microscope-image-analysis-toolbox-tool OMIC Tools] | |||
|style="text-align:center;width:10%"|[https://github.com/mitobo-hub GitHub] | |||
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'''How to get MiToBo?'''<br> | |||
* ImageJ-Users:<br> download the [https://moon.informatik.uni-halle.de/archiva/repository/releases/de/unihalle/informatik/MiToBo/mitobo-plugins/1.8.3/mitobo-plugins-1.8.3-bin.zip MiToBo-Plugins package] and follow the installation instructions to be found [[Installation | here]]. | |||
* Fiji-Users:<br> simply add MiToBo's update site [http://sites.imagej.net/MiToBo http://sites.imagej.net/MiToBo] to your Fiji installation | |||
* use in general:<br> you can download MiToBo and the MiToBo plugins package [[Downloads | here]]. <br/> | |||
You can find the API documentation for this release [http://www.informatik.uni-halle.de/mitobo/api/index.html here].<br/> | |||
Furthermore MiToBo offers you a user and programmer guide<br> which you can download [http://www.informatik.uni-halle.de/mitobo/downloads/manual/MiToBoManual.pdf here]. | |||
You can find the API documentation for this release [http://www.informatik.uni-halle.de/mitobo/api/index.html here].<br/> | </div> | ||
Furthermore MiToBo offers you a user and programmer guide which you can download [http://www.informatik.uni-halle.de/mitobo/downloads/manual/MiToBoManual.pdf here]. | </div> | ||
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'''Latest News'''<br> | |||
* MiToBo 1.8.6 will be released soon! Apart from some bug fixes<br> it will also include new functionality for plant cell shape analysis. | |||
* 03/2017: MiToBo 1.8.5 and MiToBo-Plugins 1.8.4 have been released. | |||
* 12/2016: MiToBo 1.8.4 and MiToBo-Plugins 1.8.3 have been released.<br> Also MiToBo's update site in Fiji now offers version 1.8.3.<br> Note that this requires the Java-8 update site to be activated as well. | |||
The news archive can be found [[News Archive | here]]. | The news archive can be found [[News Archive | here]]. | ||
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== Licensing information | </div> | ||
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'''Licensing information'''<br> | |||
MiToBo is free software: you can redistribute it and/or modify under the terms of the [http://www.gnu.org/licenses/gpl-3.0.html GNU General Public License version 3] or (at your option) any later version as published by the [http://www.fsf.org/ Free Software Foundation]. | MiToBo is free software: you can redistribute it and/or modify under the terms of the [http://www.gnu.org/licenses/gpl-3.0.html GNU General Public License version 3] or (at your option) any later version as published by the [http://www.fsf.org/ Free Software Foundation]. | ||
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== Bug reports & Feature requests | </div> | ||
Bug reports and feature requests can be submitted | <br> | ||
Before reporting a new bug, please check if that bug has already been submitted | <div style="margin: 0; margin-right:10px; border: 2px solid #dfdfdf; background-color:#f8f8ff;"> | ||
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'''Bug reports & Feature requests'''<br> | |||
Bug reports and feature requests can be submitted as issues on [https://github.com/mitobo-hub/mitobo/issues Github] or by mail to [mailto:mitobo@informatik.uni-halle.de mitobo@informatik.uni-halle.de]. Before reporting a new bug or requesting a new feature, please check if that bug has already been submitted. | |||
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Revision as of 15:31, 14 July 2017
MiToBo - A microscope image analysis toolbox
What is MiToBo?
Furthermore, MiToBo offers a user- and programmer friendly framework for developing algorithms that have properties not available in ImageJ,
MiToBo completely separates the implementation of image processing algorithms from potential user interfaces.
MiToBo takes full advantage of Alida's features, hence, provides a framework for implementing image analysis algorithms allowing for automatic documentation and automatic user interface generation, and includes the graphical programming editor Grappa for user-friendly design of more complex processing pipelines.
Visit MiToBo also at...
|
How to get MiToBo?
You can find the API documentation for this release here.
Latest News
The news archive can be found here.
Licensing information
Bug reports & Feature requests |