Downloads - Revision history

Moeller: /* Quick Start */

2023-11-29T11:02:16Z

Quick Start

← Older revision		Revision as of 13:02, 29 November 2023
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	* MiToBo		* MiToBo
	For some operators additional sites are required:		For some operators additional sites are required:
	* Biomedgroup (e.g., PaCeQuant)		* Biomedgroup (e.g., for PaCeQuant)

	<br>		<br>

Moeller: /* Releases and Downloads */

2023-11-29T11:01:48Z

Releases and Downloads

← Older revision		Revision as of 13:01, 29 November 2023
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	<br>		<br>

	== Releases ~~and Downloads~~ ==		== Downloads and Releases ==

	The current release of the MiToBo core distribution and also of the extended MiToBo-Plugins distribution is 2.3.1.		The current release of the MiToBo core distribution and also of the extended MiToBo-Plugins distribution is 2.3.1.

Moeller: /* Quick Start */

2023-11-29T11:01:02Z

Quick Start

← Older revision		Revision as of 13:01, 29 November 2023
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	To enable this site in your Fiji installation refer to the [http://fiji.sc/How_to_follow_a_3rd_party_update_site Fiji documentation].		To enable this site in your Fiji installation refer to the [http://fiji.sc/How_to_follow_a_3rd_party_update_site Fiji documentation].

			<br>
			For installing MiToBo this way you need to activate the following site:
			* MiToBo
			For some operators additional sites are required:
			* Biomedgroup (e.g., PaCeQuant)

			<br>
	More details how to install and run MiToBo can be found on our [[Installation]] page.		More details how to install and run MiToBo can be found on our [[Installation]] page.
	<br>		<br>

Moeller: /* Quick Start */

2023-11-29T10:43:18Z

Quick Start

← Older revision		Revision as of 12:43, 29 November 2023
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	== Quick Start ==		== Quick Start ==
	The easiest and fastest way to run MiToBo is to activate MiToBo's update site in Fiji:		The easiest and fastest way to install and run MiToBo is to activate MiToBo's update site in Fiji:

	[http://sites.imagej.net/MiToBo http://sites.imagej.net/MiToBo]<br>		[http://sites.imagej.net/MiToBo http://sites.imagej.net/MiToBo]<br>
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	More details how to install and run MiToBo can be found on our [[Installation]] page.		More details how to install and run MiToBo can be found on our [[Installation]] page.
	<br>		<br>


	== Releases and Downloads ==		== Releases and Downloads ==

Moeller at 10:41, 29 November 2023

2023-11-29T10:41:23Z

← Older revision		Revision as of 12:41, 29 November 2023
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	More details how to install and run MiToBo can be found on our [[Installation]] page.		More details how to install and run MiToBo can be found on our [[Installation]] page.
			<br>


	== Releases and Downloads ==		== Releases and Downloads ==
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	The zip file contains a README file containing more information about installing and configuring the project template.		The zip file contains a README file containing more information about installing and configuring the project template.
	<br/>		<br/>


	== Manual ==		== Manual ==
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	* MiToBo-Guide, Version 1.0 [http://www.informatik.uni-halle.de/mitobo/downloads/manual/MiToBoManual.pdf pdf]		* MiToBo-Guide, Version 1.0 [http://www.informatik.uni-halle.de/mitobo/downloads/manual/MiToBoManual.pdf pdf]
	<br/>		<br>


	== Additional resources ==		== Additional resources ==
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	* self extracting installer for Windows [http://www.informatik.uni-halle.de/mitobo/downloads/chipory-setup.exe chipory-setup.exe]		* self extracting installer for Windows [http://www.informatik.uni-halle.de/mitobo/downloads/chipory-setup.exe chipory-setup.exe]
	Source code for Chipory is available upon request.		Source code for Chipory is available upon request.
	<br/>		<br>

Moeller at 10:38, 29 November 2023

2023-11-29T10:38:27Z

← Older revision		Revision as of 12:38, 29 November 2023
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	~~Here you can find the current release of MiToBo for download. Likewise older versions~~ and ~~additional libraries required~~ to run MiToBo ~~can be found here.~~		== Quick Start ==
			The easiest and fastest way to run MiToBo is to activate MiToBo's update site in Fiji:

	~~For detailed information on the installation process take a look at the~~ [~~[Installation~~]~~] page.~~		[http://sites.imagej.net/MiToBo http://sites.imagej.net/MiToBo]<br>

	~~== Current release ==~~		To enable this site in your Fiji installation refer to the [http://fiji.sc/How_to_follow_a_3rd_party_update_site Fiji documentation].

	~~The current release of~~ the ~~MiToBo core distribution is 2~~.~~1 and of the extended MiToBo-Plugins distribution 2.1~~.

	~~Since release 1.3 we support Maven for managing~~ MiToBo~~'s resources.<br> You~~ can ~~download the MiToBo distributions as well as the Maven artifacts from~~ our ~~Maven server:~~		More details how to install and run MiToBo can be found on our [[Installation]] page.

	~~[https://moon.informatik.uni-halle.de/archiva/#browse/de.unihalle.informatik.MiToBo https://moon.informatik.uni-halle.de/archiva/#browse/de.unihalle.informatik.MiToBo]~~		== Releases and Downloads ==

	~~<blockquote style="background~~-~~color: lightgrey; border: solid thin grey;">~~		The current release of the MiToBo core distribution and also of the extended MiToBo-Plugins distribution is 2.3.1.
	~~'''[[Using MiToBo with ImageJ~~ 1.~~x:]]'''<br>~~
	~~For using MiToBo with ImageJ it is the easiest to download the distribution zipfile,<br>~~

	~~[https://moon.informatik.uni-halle.de/archiva/repository/releases/de/unihalle/informatik/MiToBo/mitobo-plugins/~~1.~~8.15/mitobo-plugins-1.8.15-bin.zip https://moon.informatik.uni-halle.de/archiva/repository/releases/de/unihalle/informatik/MiToBo/mitobo-plugins/1.8.15/mitobo-plugins-1.8.15-bin.zip]<br>~~		Since release 1.3 we support Maven for managing MiToBo's resources.<br> You can download the MiToBo distributions as well as the Maven artifacts from our Maven server:

	~~which already includes '''''all''''' dependencies and ships with some scripts to run~~ MiToBo's ~~operators and plugins out of the box~~.<br> ~~See~~ the ~~[http://www2.informatik.uni-halle.de/agprbio/mitobo/index.php/Installation installation instructions] for further information.~~
	~~</blockquote>~~

	~~<blockquote style="background-color: lightgrey; border: solid thin grey;">~~
	~~'''[[Using~~ MiToBo ~~with Fiji~~:~~]]'''<br>~~
	~~Since release 1.5 MiToBo is available via a Fiji update site:~~

	~~[http://sites.imagej.net/MiToBo http://sites.imagej.net/MiToBo]<br>~~

	~~To enable this site in your Fiji installation refer to the~~ [~~http~~://~~fiji~~.sc/~~How_to_follow_a_3rd_party_update_site Fiji documentation]~~.		[https://moon.informatik.uni-halle.de/#browse/de.unihalle.informatik.MiToBo https://moon.informatik.uni-halle.de/#browse/de.unihalle.informatik.MiToBo]
	</~~blockquote>~~

	There are two MiToBo distributions available:		There are two MiToBo distributions available:
	* <b>MiToBo:</b><br> this package contains the core of MiToBo, i.e. all operators, the MiToBo runners for operator execution and also Grappa;<br> <b>not included</b> are the plugins to run MiToBo from within ImageJ 1.x, hence, this distribution is mainly for stand-alone usage of MiToBo and development purposes<br>		* <b>MiToBo:</b><br> this package contains the core of MiToBo, i.e. all operators, the MiToBo runners for operator execution and also Grappa;<br> <b>not included</b> are the plugins to run MiToBo from within ImageJ 1.x, hence, this distribution is mainly for stand-alone usage of MiToBo and development purposes<br>
	* <b>MiToBo-Plugins:</b><br> this package contains the complete MiToBo distribution, some special plugins like the [[Applications/MTBCellCounter \| MTB Cell Counter]], and in addition some ImageJ plugins to run MiToBo operators from within ImageJ; you should download the MiToBo-Plugins distribution if you like to use MiToBo with ImageJ		* <b>MiToBo-Plugins:</b><br> this package contains the complete MiToBo distribution, some special plugins like the [[Applications/MTBCellCounter \| MTB Cell Counter]], and in addition some ImageJ plugins to run MiToBo operators from within ImageJ; you should download the MiToBo-Plugins distribution if you like to use MiToBo with ImageJ<br>

	<br>

	Since release 1.8 MiToBo's implementation requires at least Java 1.8.		Since release 1.8 MiToBo's implementation requires at least Java 1.8.
	<br>		<br>

	~~Below~~ the ~~following kinds~~ of files are available for download:		At the bottom of this page additional files are available for download:
	* ~~Distribution~~: complete distributions including all dependencies, scripts, documentation, etc.		* Old distributions: complete distributions including all dependencies, scripts, documentation, etc.
	* Binaries only: only the jar archives, no dependencies ~~nor~~ documentation		* Binaries only: only the jar archives, no dependencies neither documentation
	* ~~API~~: Javadoc ~~API~~		* APIs: Javadoc APIs
	<br>		<br>

Moeller at 14:55, 1 December 2020

2020-12-01T14:55:37Z

← Older revision		Revision as of 16:55, 1 December 2020
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	== Current release ==		== Current release ==

	The current release of the MiToBo core distribution is 2.0 and of the extended MiToBo-Plugins distribution 2.0.		The current release of the MiToBo core distribution is 2.1 and of the extended MiToBo-Plugins distribution 2.1.

	Since release 1.3 we support Maven for managing MiToBo's resources.<br> You can download the MiToBo distributions as well as the Maven artifacts from our Maven server:		Since release 1.3 we support Maven for managing MiToBo's resources.<br> You can download the MiToBo distributions as well as the Maven artifacts from our Maven server:

Moeller at 17:03, 16 May 2020

2020-05-16T17:03:55Z

← Older revision		Revision as of 19:03, 16 May 2020
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	== Current release ==		== Current release ==

	The current release of the MiToBo core distribution is 1.~~8.15~~ and of the extended MiToBo-Plugins distribution ~~1.8~~.15.		The current release of the MiToBo core distribution is 2.0 and of the extended MiToBo-Plugins distribution 2.0.

	Since release 1.3 we support Maven for managing MiToBo's resources.<br> You can download the MiToBo distributions as well as the Maven artifacts from our Maven server:		Since release 1.3 we support Maven for managing MiToBo's resources.<br> You can download the MiToBo distributions as well as the Maven artifacts from our Maven server:

Moeller: /* Maven Project Template */

2019-11-14T13:08:00Z

Maven Project Template

← Older revision		Revision as of 15:08, 14 November 2019
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	For getting started with MiToBo and Maven a project template is provided:		For getting started with MiToBo and Maven a project template is provided:

	[http://www.informatik.uni-halle.de/mitobo/downloads/maven/mitobo-demo-project-1.1-src.zip Maven project template [zip]]		[http://www.informatik.uni-halle.de/mitobo/downloads/maven/mitobo-demo-project-1.2-src.zip Maven project template [zip]]

	The project is readily configured and you can immediately start with own developments.<br>		The project is readily configured and you can immediately start with own developments.<br>

Moeller at 13:39, 30 July 2019

2019-07-30T13:39:23Z

← Older revision		Revision as of 15:39, 30 July 2019
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	== Current release ==		== Current release ==

	The current release of the MiToBo core distribution is 1.8.14 and of the extended MiToBo-Plugins distribution 1.8.14.		The current release of the MiToBo core distribution is 1.8.15 and of the extended MiToBo-Plugins distribution 1.8.15.

	Since release 1.3 we support Maven for managing MiToBo's resources.<br> You can download the MiToBo distributions as well as the Maven artifacts from our Maven server:		Since release 1.3 we support Maven for managing MiToBo's resources.<br> You can download the MiToBo distributions as well as the Maven artifacts from our Maven server:
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	For using MiToBo with ImageJ it is the easiest to download the distribution zipfile,<br>		For using MiToBo with ImageJ it is the easiest to download the distribution zipfile,<br>

	[https://moon.informatik.uni-halle.de/archiva/repository/releases/de/unihalle/informatik/MiToBo/mitobo-plugins/1.8.13/mitobo-plugins-1.8.13-bin.zip https://moon.informatik.uni-halle.de/archiva/repository/releases/de/unihalle/informatik/MiToBo/mitobo-plugins/1.8.13/mitobo-plugins-1.8.13-bin.zip]<br>		[https://moon.informatik.uni-halle.de/archiva/repository/releases/de/unihalle/informatik/MiToBo/mitobo-plugins/1.8.15/mitobo-plugins-1.8.15-bin.zip https://moon.informatik.uni-halle.de/archiva/repository/releases/de/unihalle/informatik/MiToBo/mitobo-plugins/1.8.15/mitobo-plugins-1.8.15-bin.zip]<br>

	which already includes '''''all''''' dependencies and ships with some scripts to run MiToBo's operators and plugins out of the box.<br> See the [http://www2.informatik.uni-halle.de/agprbio/mitobo/index.php/Installation installation instructions] for further information.		which already includes '''''all''''' dependencies and ships with some scripts to run MiToBo's operators and plugins out of the box.<br> See the [http://www2.informatik.uni-halle.de/agprbio/mitobo/index.php/Installation installation instructions] for further information.