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=== March 2012 - Preview of Release 1.0 === | |||
Very soon a new version of MiToBo will be released! Amongst others one of the main features will be the automatic user interface generation for implemented operators.<br/> In particular, MiToBo will include mature (automatically generated!) graphical user interfaces for several of its operators, e.g. for the scratch assay analyzer or the snake segmentation. To get a first impression on these interfaces take a look at the beta release. This beta release does not contain MiToBo as a whole, but just selected operators. It is also not fully functional, but allows you to get a first impression of what MiToBo's next release is going to offer you, and especially how easy it will be even for non-experts to use MiToBo's functionality! | |||
* Download the beta release [http://www.informatik.uni-halle.de/mitobo/downloads/MiToBo-preview-1.0-beta.jar here]! | |||
Just put the jar archive into your ImageJ plugins folder and make sure that it is also part of your classpath! In addition you will also need the following jars: | |||
* [http://rsbweb.nih.gov/ij/ ImageJ], Version 1.46g | |||
* [http://xmlbeans.apache.org/ XMLBeans], Version 2.5.0 | |||
* [http://xstream.codehaus.org/ XStream], Version 1.3.1 | |||
* [http://www.loci.wisc.edu/software/bio-formats/ Loci Tools], Version 4.3.3 | |||
* [http://math.nist.gov/javanumerics/jama/ Jama], Version 1.0.2 | |||
* [http://javahelp.java.net/ JavaHelp], Version 2.0_05 | |||
* [http://www.csie.ntu.edu.tw/~cjlin/libsvm/ LIBSVM], Version 3.1 | |||
Finally some MiToBo internal jars are required (have a look at the download page for more details): | |||
* [http://www.informatik.uni-halle.de/mitobo/downloads/aldgraphml/aldgraphml.jar ALDGraphml] | |||
* [http://www.informatik.uni-halle.de/mitobo/downloads/mtbxml/mtbxml.jar mtbxml] | |||
* [http://www.informatik.uni-halle.de/mitobo/downloads/MiToBo-Help.jar MiToBo-Help] | |||
* [http://www2.informatik.uni-halle.de/agprbio/alida/downloads/sezpoz-1.9-alida.jar Alida-SezPoz]. | |||
... and for the snakes you require C++ native libs: | |||
* 32-bit Linux [http://www.informatik.uni-halle.de/mitobo/downloads/native/libJNI_Cgal_Polygon2D-64-betaRelease.so lib], 64-bit Linux [http://www.informatik.uni-halle.de/mitobo/downloads/native/libJNI_Cgal_Polygon2D-64-betaRelease.so lib], 32-bit Windows [http://www.informatik.uni-halle.de/mitobo/downloads/native/libJNI_Cgal_Polygon2D-win32-betaRelease.dll lib] | |||
On running ImageJ you will find an entry "MiToBo->mitoboRunner->MiToBo Runner" in the plugins menu. By selecting the item the operator choser window will pop-up and allow you to browse and execute some of the MiToBo operators. We hope that you enjoy MiToBo! If you have questions or comments, please do not hesitate to contact us, we are pleased with any feedback to further improve MiToBo! | |||
=== September 2011 === | === September 2011 === | ||
Version 0.9.6 of MiToBo has been released. <br/> | Version 0.9.6 of MiToBo has been released. <br/> | ||
Revision as of 10:28, 17 May 2013
March 2012 - Preview of Release 1.0
Very soon a new version of MiToBo will be released! Amongst others one of the main features will be the automatic user interface generation for implemented operators.
In particular, MiToBo will include mature (automatically generated!) graphical user interfaces for several of its operators, e.g. for the scratch assay analyzer or the snake segmentation. To get a first impression on these interfaces take a look at the beta release. This beta release does not contain MiToBo as a whole, but just selected operators. It is also not fully functional, but allows you to get a first impression of what MiToBo's next release is going to offer you, and especially how easy it will be even for non-experts to use MiToBo's functionality!
- Download the beta release here!
Just put the jar archive into your ImageJ plugins folder and make sure that it is also part of your classpath! In addition you will also need the following jars:
- ImageJ, Version 1.46g
- XMLBeans, Version 2.5.0
- XStream, Version 1.3.1
- Loci Tools, Version 4.3.3
- Jama, Version 1.0.2
- JavaHelp, Version 2.0_05
- LIBSVM, Version 3.1
Finally some MiToBo internal jars are required (have a look at the download page for more details):
... and for the snakes you require C++ native libs:
On running ImageJ you will find an entry "MiToBo->mitoboRunner->MiToBo Runner" in the plugins menu. By selecting the item the operator choser window will pop-up and allow you to browse and execute some of the MiToBo operators. We hope that you enjoy MiToBo! If you have questions or comments, please do not hesitate to contact us, we are pleased with any feedback to further improve MiToBo!
September 2011
Version 0.9.6 of MiToBo has been released.
It will be presented at the Workshop Microscopic Image Analysis with Applications in Biology
in Heidelberg, Germany, September 2, 2011
Most interesting new features are:
- more user-friendly I/O interfaces
- MiCA, the 2D microscope cell image analyzer
- several bugfixes and internal enhancements
Check the download page for jars and sources.
June 2011
Version 0.9.5 of MiToBo has just been released!
Most interesting new features are:
- scratch assay analysis with levelsets
- enhanced image I/O
- easy operator development with annotations
October 2010
The first version (v0.9) of MiToBo has been released.
