Applications/ScratchAssayAnalyzer

Scratch assay analysis

published in
M. Glaß, B. Möller, A. Zirkel, K. Wächter, S. Hüttelmaier and S. Posch,
"Scratch Assay Analysis with Topology-preserving Level Sets and Texture Measures".
Proc. of Iberian Conference on Pattern Recognition and Image Analysis (IbPRIA '11), LNCS 6669, pp. 100-108, Springer, Las Palmas de Gran Canaria, Spain, June 2011.

M. Glaß, B. Möller, A. Zirkel, K. Wächter, S. Hüttelmaier and S. Posch,
"Cell migration analysis: Segmenting scratch assay images with level sets and support vector machines".
Pattern Recognition, Volume 45, Issue 9, pp. 3154-3165, September 2012.

Name of Plugin/Operator:
ScratchAssayAnalyzer (since MiToBo version 0.9.5)

Description:

• Quantifies the scratch area in monolayer cell culture images with levelset techniques
• Applicable to brightfield and fluorescence images
• Combines the results from images of different time points in a results table

Example images
Scratch assay images