Applications: Difference between revisions

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Below you can find selected example applications, some of them have been published already.
Below you can find selected example applications, some of them have been published already.


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* [[Applications/PaCeQuant | PaCeQuant]] (released with MiToBo 1.8.6), <br/> for quantifying pavement cell shape in a high-throughput manner
* [[Applications/PaCeQuant | PaCeQuant]]<br/> for quantifying pavement cell shape... to appear soon!
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* [[Applications/MTBCellCounter | MTB Cell Counter]] (since MiToBo 1.5), <br/> a tool for semi-automatic labeling and counting of spot-like structures like, e.g., plastides, stress granules or p-bodies
* [[Applications/MTBCellCounter | MTB Cell Counter]] (since MiToBo 1.5), <br/> a tool for semi-automatic labeling and counting of spot-like structures like, e.g., plastides, stress granules or p-bodies

Revision as of 07:37, 22 September 2017

Several image processing pipelines have already been developed in MiToBo.
Below you can find selected example applications, some of them have been published already.

  • PaCeQuant (released with MiToBo 1.8.6),
    for quantifying pavement cell shape in a high-throughput manner
  • MTB Cell Counter (since MiToBo 1.5),
    a tool for semi-automatic labeling and counting of spot-like structures like, e.g., plastides, stress granules or p-bodies
  • Neuron Analyzer 2D
    for segmenting the area of neurites and quantify protein concentrations within these neurites
  • Actin Analyzer 2D (since MiToBo 1.4)
    for quantifying and comparing actin microfilament structures