de.unihalle.informatik.MiToBo.features

Class MorphologyAnalyzer2DInProData.InProContourSegment

java.lang.Object

de.unihalle.informatik.MiToBo.features.MorphologyAnalyzer2DInProData.InProContourSegment

Enclosing class:

MorphologyAnalyzer2DInProData

public class MorphologyAnalyzer2DInProData.InProContourSegment
extends Object

Class to represent concave/convex segments along a contour.

Field Summary

Fields

Modifier and Type	Field and Description
protected double	apicalLength Apical length of the segment, from equator to top.
protected double	basalLength Basal length of the segment, from baseline to equator.
protected double	baselineLength Length of segment baseline.
(package private) int	endPosOnContour Index of segment end pixel on contour.
(package private) double	equatorLength Length of the equator in pixels.
LinkedList<Point2D.Double>	initialSegmentPoints Initial border points of the segment (before any shift takes place).
(package private) Point2D.Double	leftBorderPoint Left boundary point of segment after potential shifts.
(package private) int	leftBorderPointPosOnContour Index of left boundary point of segment after potential shifts.
(package private) Point2D.Double	midPoint Median point of contour.
(package private) int	midPointPosOnContour Index of median segment pixel on contour.
protected MorphologyAnalyzer2DInProData.InProContourSegment	nextSegment Reference to the subsequent segment along the contour.
protected MorphologyAnalyzer2DInProData.InProContourSegment	prevSegment Reference to the preceeding segment along the contour.
(package private) Point2D.Double	rightBorderPoint Right boundary point of segment after potential shifts.
(package private) int	rightBorderPointPosOnContour Index of right boundary point of segment after potential shifts.
(package private) int	segLength Length of segment measured as number of pixels.
(package private) int	startPosOnContour Index of segment start pixel on contour.
protected double	totalLength Total length of indentation or protrusion, i.e., equals the sum of basalLength and apicalLength.
(package private) MorphologyAnalyzer2DInProData.SegmentType	type Type of segment.

Constructor Summary

Constructors

Constructor and Description
InProContourSegment()

Method Summary

Modifier and Type	Method and Description
double	getApicalLength() Get apical length.
double	getBasalLength() Get basal length.
double	getBaselineLength() Get baseline length.
double	getEquatorLength() Get equator length.
MorphologyAnalyzer2DInProData.InProContourSegment	getPrecursorSegment() Get preceeding segment along contour.
MorphologyAnalyzer2DInProData.InProContourSegment	getSuccessorSegment() Get subsequent segment along contour.
double	getTotalLength() Get total length.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

type

MorphologyAnalyzer2DInProData.SegmentType type

Type of segment.

Intrusions refer to convexities along the contour, protrusions refer to concavities.

prevSegment

protected MorphologyAnalyzer2DInProData.InProContourSegment prevSegment

Reference to the preceeding segment along the contour.

nextSegment

protected MorphologyAnalyzer2DInProData.InProContourSegment nextSegment

Reference to the subsequent segment along the contour.

initialSegmentPoints

public LinkedList<Point2D.Double> initialSegmentPoints

Initial border points of the segment (before any shift takes place).

segLength

int segLength

Length of segment measured as number of pixels.

startPosOnContour

int startPosOnContour

Index of segment start pixel on contour.

endPosOnContour

int endPosOnContour

Index of segment end pixel on contour.

midPoint

Point2D.Double midPoint

Median point of contour.

midPointPosOnContour

int midPointPosOnContour

Index of median segment pixel on contour.

equatorLength

double equatorLength

Length of the equator in pixels.

If length is smaller than 0 there are no inflection points along segment.

leftBorderPoint

Point2D.Double leftBorderPoint

Left boundary point of segment after potential shifts.

leftBorderPointPosOnContour

int leftBorderPointPosOnContour

Index of left boundary point of segment after potential shifts.

rightBorderPoint

Point2D.Double rightBorderPoint

Right boundary point of segment after potential shifts.

rightBorderPointPosOnContour

int rightBorderPointPosOnContour

Index of right boundary point of segment after potential shifts.

baselineLength

protected double baselineLength

Length of segment baseline.

apicalLength

protected double apicalLength

Apical length of the segment, from equator to top.

basalLength

protected double basalLength

Basal length of the segment, from baseline to equator.

totalLength

protected double totalLength

Total length of indentation or protrusion, i.e., equals the sum of basalLength and apicalLength.

Constructor Detail

InProContourSegment

public InProContourSegment()

Method Detail

getPrecursorSegment

public MorphologyAnalyzer2DInProData.InProContourSegment getPrecursorSegment()

Get preceeding segment along contour.

Note that the preceeding segment is always of complementary type (see MorphologyAnalyzer2DInProData.SegmentType).

Returns:

Preceeding segment.

getSuccessorSegment

public MorphologyAnalyzer2DInProData.InProContourSegment getSuccessorSegment()

Get subsequent segment along contour.

Note that the subsequent segment is always of complementary type (see MorphologyAnalyzer2DInProData.SegmentType).

Returns:

Subsequent segment.

getEquatorLength

public double getEquatorLength()

Get equator length.

Returns:

Length of equator.

getBaselineLength

public double getBaselineLength()

Get baseline length.

Returns:

Length of baseline.

getApicalLength

public double getApicalLength()

Get apical length.

Returns:

Apical length.

getBasalLength

public double getBasalLength()

Get basal length.

Returns:

Basal length.

getTotalLength

public double getTotalLength()

Get total length.

Returns:

Total length.