Serialized Form (mitobo 2.0 API)

Package de.unihalle.informatik.MiToBo.apps.cells2D
- Class de.unihalle.informatik.MiToBo.apps.cells2D.Mica2DTableModel extends MTBTableModel implements Serializable
  - Serialized Fields
    - lastDir
```
File lastDir
```
      For convenience: always open last directory for saving.
    - header
```
String[] header
```
      Header defines.
Package de.unihalle.informatik.MiToBo.apps.neurites2D
- Class de.unihalle.informatik.MiToBo.apps.neurites2D.NeuriteDetector2DException extends Exception implements Serializable
  - Serialized Fields
    - error
```
String error
```
- Class de.unihalle.informatik.MiToBo.apps.neurites2D.NeuriteExtractor2DException extends Exception implements Serializable
  - Serialized Fields
    - error
```
String error
```
Package de.unihalle.informatik.MiToBo.apps.neurons2D
- Class de.unihalle.informatik.MiToBo.apps.neurons2D.NeuronAnalyzer2DException extends Exception implements Serializable
  - Serialized Fields
    - error
```
String error
```
Package de.unihalle.informatik.MiToBo.core.dataio.provider.cmdline
- Class de.unihalle.informatik.MiToBo.core.dataio.provider.cmdline.MTBDataIOFile.MTBDataIOFileButton extends JPanel implements Serializable
  
  serialVersionUID:
  
  -5833553725994371638L
  - Serialized Fields
    - button
```
JButton button
```
    - roiManagerChecker
```
JCheckBox roiManagerChecker
```
    - roiManagerAdd
```
JButton roiManagerAdd
```
    - pathfield
```
JTextField pathfield
```
    - outdata
```
Object outdata
```
    - cl
```
Class<T> cl
```
    - roisAdded
```
boolean roisAdded
```
Package de.unihalle.informatik.MiToBo.core.dataio.provider.swing
- Class de.unihalle.informatik.MiToBo.core.dataio.provider.swing.MTBImageDataIOSwing.ImageShowButton extends JButton implements Serializable
  - Serialized Fields
    - obj
```
Object obj
```
      Image object associated with the button.
      Supported types are MTBImage and ImagePlus.
- Class de.unihalle.informatik.MiToBo.core.dataio.provider.swing.MTBImageDataIOSwing.ImageShowPanel extends JPanel implements Serializable
  - Serialized Fields
    - button
```
MTBImageDataIOSwing.ImageShowButton button
```
      Button associated with the panel.
- Class de.unihalle.informatik.MiToBo.core.dataio.provider.swing.MTBJFreeChartDataIOSwing.ChartShowButton extends JButton implements Serializable
  - Serialized Fields
    - chart
```
org.jfree.chart.JFreeChart chart
```
      JFreeChart object associated with the button.
    - chartFrame
```
JFrame chartFrame
```
      Frame to display the chart.
- Class de.unihalle.informatik.MiToBo.core.dataio.provider.swing.MTBJFreeChartDataIOSwing.ChartShowPanel extends JPanel implements Serializable
  - Serialized Fields
    - button
```
MTBJFreeChartDataIOSwing.ChartShowButton button
```
      Button associated with the panel.
Package de.unihalle.informatik.MiToBo.core.dataio.provider.swing.components
- Class de.unihalle.informatik.MiToBo.core.dataio.provider.swing.components.MTBTableWindow extends de.unihalle.informatik.Alida.dataio.provider.swing.components.ALDTableWindow implements Serializable
Package de.unihalle.informatik.MiToBo.core.datatypes
- Class de.unihalle.informatik.MiToBo.core.datatypes.MTBLineSegment2D extends Line2D.Double implements Serializable
  - Serialized Fields
    - width
```
double width
```
      Width of the segment (for compatibility with ImageJ).
- Class de.unihalle.informatik.MiToBo.core.datatypes.MTBNeuriteSkelGraphException extends Exception implements Serializable
  - Serialized Fields
    - error
```
String error
```
- Class de.unihalle.informatik.MiToBo.core.datatypes.MTBPolygon2DException extends Exception implements Serializable
  - Serialized Fields
    - error
```
String error
```
      Exception error message.
Package de.unihalle.informatik.MiToBo.core.exceptions
- Class de.unihalle.informatik.MiToBo.core.exceptions.MTBDatatypeException extends MTBException implements Serializable
  - Serialized Fields
    - type
```
MTBDatatypeException.DatatypeExceptionType type
```
      Type of exception.
- Class de.unihalle.informatik.MiToBo.core.exceptions.MTBException extends de.unihalle.informatik.Alida.exceptions.ALDException implements Serializable
- Class de.unihalle.informatik.MiToBo.core.exceptions.MTBImageException extends MTBException implements Serializable
Package de.unihalle.informatik.MiToBo.core.grappa
- Class de.unihalle.informatik.MiToBo.core.grappa.MTBGrappaFrame extends de.unihalle.informatik.Alida.grappa.ALDGrappaFrame implements Serializable
- Class de.unihalle.informatik.MiToBo.core.grappa.MTBGrappaWorkbench extends de.unihalle.informatik.Alida.grappa.ALDGrappaWorkbench implements Serializable
- Class de.unihalle.informatik.MiToBo.core.grappa.MTBGrappaWorkbenchTab extends de.unihalle.informatik.Alida.grappa.ALDGrappaWorkbenchTab implements Serializable
Package de.unihalle.informatik.MiToBo.core.gui
- Class de.unihalle.informatik.MiToBo.core.gui.MTBChooseOpNameFrame extends de.unihalle.informatik.Alida.gui.ALDChooseOpNameFrame implements Serializable
  - Serialized Fields
    - debug
```
boolean debug
```
      Debug flag (not accessible from outside).
- Class de.unihalle.informatik.MiToBo.core.gui.MTBOperatorConfigurationFrame extends de.unihalle.informatik.Alida.gui.ALDOperatorConfigurationFrame implements Serializable
- Class de.unihalle.informatik.MiToBo.core.gui.MTBOperatorControlFrame extends de.unihalle.informatik.Alida.gui.ALDOperatorControlFrame implements Serializable
- Class de.unihalle.informatik.MiToBo.core.gui.MTBOperatorDocumentationFrame extends de.unihalle.informatik.Alida.gui.ALDOperatorDocumentationFrame implements Serializable
  - Serialized Fields
    - opName
```
String opName
```
      Name of associated operator.
    - opPackage
```
String opPackage
```
      Package of associated operator/tool.
Package de.unihalle.informatik.MiToBo.core.imageJ
- Class de.unihalle.informatik.MiToBo.core.imageJ.ImagePlusInteractionFrame extends JFrame implements Serializable
  - Serialized Fields
    - img
```
MTBImageRGB img
```
      Associated MiToBo image.
    - canvas
```
ij.gui.ImageCanvas canvas
```
      Canvas used by ImageJ to display the image.
    - clickedPoints
```
LinkedList<E> clickedPoints
```
      List of pixels the user selected.
- Class de.unihalle.informatik.MiToBo.core.imageJ.MTBBorder2DSetROI extends ij.gui.Roi implements Serializable
  - Serialized Fields
    - borderSet
```
MTBBorder2DSet borderSet
```
      Set of 2D borders.
- Class de.unihalle.informatik.MiToBo.core.imageJ.MTBContour2DSetROI extends ij.gui.Roi implements Serializable
  - Serialized Fields
    - contourSet
```
MTBContour2DSet contourSet
```
      Set of 2D contours.
- Class de.unihalle.informatik.MiToBo.core.imageJ.MTBPolygon2DSetROI extends ij.gui.Roi implements Serializable
  - Serialized Fields
    - polygonSet
```
MTBPolygon2DSet polygonSet
```
      Set of 2D polygons.
- Class de.unihalle.informatik.MiToBo.core.imageJ.MTBRegion2DSetROI extends ij.gui.Roi implements Serializable
  - Serialized Fields
    - regionSet
```
MTBRegion2DSet regionSet
```
      Set of 2D regions.
    - borderSet
```
MTBBorder2DSet borderSet
```
      Set of borders of the 2D regions.
Package de.unihalle.informatik.MiToBo.features
- Class de.unihalle.informatik.MiToBo.features.MorphologyAnalyzer2DInProData.InflectionPoint extends Point2D.Double implements Serializable
  - Serialized Fields
    - type
```
MorphologyAnalyzer2DInProData.SegmentType type
```
      Type of segment starting with this point.
Package de.unihalle.informatik.MiToBo.gui
- Class de.unihalle.informatik.MiToBo.gui.CheckBoxPanel extends JPanel implements Serializable
  
  serialVersionUID:
  
  -9637672307282272L
  - Serialized Fields
    - cbbox
```
Box cbbox
```
      container for arrangement of checkboxes
    - cbs
```
JCheckBox[] cbs
```
      checkbox components
- Class de.unihalle.informatik.MiToBo.gui.ImageReaderOptionsPane extends JPanel implements Serializable
  
  serialVersionUID:
  
  8158746416069757520L
  - Serialized Fields
    - jfc
```
JFileChooser jfc
```
    - seriespanels
```
ConcurrentHashMap<K,V> seriespanels
```
    - seriesnames
```
ConcurrentHashMap<K,V> seriesnames
```
    - seriesIndices
```
HashMap<K,V> seriesIndices
```
    - spbox
```
Box spbox
```
    - statuslabel1
```
JLabel statuslabel1
```
    - statuslabel2
```
JLabel statuslabel2
```
- Class de.unihalle.informatik.MiToBo.gui.ImageWriterOptionsPane extends JPanel implements Serializable
  
  serialVersionUID:
  
  7502452479625180633L
  - Serialized Fields
    - comppanel
```
RadioButtonPanel comppanel
```
    - codpanel
```
RadioButtonPanel codpanel
```
    - qualpanel
```
RadioButtonPanel qualpanel
```
    - vidpanel
```
TwoColumnPanel vidpanel
```
    - fpsfield
```
JTextField fpsfield
```
    - jfc
```
JFileChooser jfc
```
    - compression
```
String compression
```
    - fps
```
int fps
```
    - defaultfps
```
int defaultfps
```
    - quality
```
int quality
```
    - codec
```
int codec
```
- Class de.unihalle.informatik.MiToBo.gui.MTBTableModel extends DefaultTableModel implements Serializable
  - Serialized Fields
    - rows
```
int rows
```
      Number of rows of the table.
    - cols
```
int cols
```
      Number of columns of the table.
    - data
```
Object[][] data
```
      The data contained in the table.
    - delimiter
```
de.unihalle.informatik.Alida.dataio.provider.swing.components.ALDTableWindow.TableModelDelimiter delimiter
```
      Delimiter to be used when exporting the model.
    - headerStrings
```
Vector<E> headerStrings
```
      Header defines.
- Class de.unihalle.informatik.MiToBo.gui.RadioButtonPanel extends JPanel implements Serializable
  
  serialVersionUID:
  
  6129897738812922848L
  - Serialized Fields
    - rbbox
```
Box rbbox
```
      vertical box to place the radio buttons on the panel
    - rbgroup
```
ButtonGroup rbgroup
```
      the logical group of radio buttons
    - selection
```
String selection
```
      string/label of the selected radio button
- Class de.unihalle.informatik.MiToBo.gui.TwoColumnPanel extends JPanel implements Serializable
  
  serialVersionUID:
  
  -8467133285753886082L
  - Serialized Fields
    - entriespanel
```
JPanel entriespanel
```
      panel to hold all the entries
Package de.unihalle.informatik.MiToBo.imageJ.plugins.cellCounter.datatypes
- Class de.unihalle.informatik.MiToBo.imageJ.plugins.cellCounter.datatypes.CellCntrMarkerVector extends Vector<CellCntrMarker> implements Serializable
  - Serialized Fields
    - type
```
int type
```
      Type ID of markers.
    - color
```
Color color
```
      Color of markers.
Package de.unihalle.informatik.MiToBo.io.images
- Class de.unihalle.informatik.MiToBo.io.images.OverwriteException extends de.unihalle.informatik.Alida.exceptions.ALDOperatorException implements Serializable
  
  serialVersionUID:
  
  3887795755287599831L
Package de.unihalle.informatik.MiToBo.segmentation.activecontours.exceptions
- Class de.unihalle.informatik.MiToBo.segmentation.activecontours.exceptions.MTBActiveContourException extends MTBException implements Serializable
  - Serialized Fields
    - type
```
MTBActiveContourException.ExceptionType type
```
      Type of exception.
- Class de.unihalle.informatik.MiToBo.segmentation.activecontours.exceptions.MTBLevelsetException extends MTBActiveContourException implements Serializable
- Class de.unihalle.informatik.MiToBo.segmentation.activecontours.exceptions.MTBSnakeException extends MTBActiveContourException implements Serializable
Package de.unihalle.informatik.MiToBo.segmentation.snakes.datatypes
- Class de.unihalle.informatik.MiToBo.segmentation.snakes.datatypes.MTBSnakePoint2D extends Point2D.Double implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - oldId
```
int oldId
```
      Old index (position) of the point within the snake.
Package de.unihalle.informatik.MiToBo.visualization.drawing
- Class de.unihalle.informatik.MiToBo.visualization.drawing.MTBPlotHistogram.HistogramFrame extends JFrame implements Serializable
  - Serialized Fields
    - display
```
MTBPlotHistogram.Histogram display
```

Serialized Form

Package de.unihalle.informatik.MiToBo.apps.cells2D

Class de.unihalle.informatik.MiToBo.apps.cells2D.Mica2DTableModel extends MTBTableModel implements Serializable

Serialized Fields

lastDir

header

Package de.unihalle.informatik.MiToBo.apps.neurites2D

Class de.unihalle.informatik.MiToBo.apps.neurites2D.NeuriteDetector2DException extends Exception implements Serializable

Serialized Fields

error

Class de.unihalle.informatik.MiToBo.apps.neurites2D.NeuriteExtractor2DException extends Exception implements Serializable

Serialized Fields

error

Package de.unihalle.informatik.MiToBo.apps.neurons2D

Class de.unihalle.informatik.MiToBo.apps.neurons2D.NeuronAnalyzer2DException extends Exception implements Serializable

Serialized Fields

error

Package de.unihalle.informatik.MiToBo.core.dataio.provider.cmdline

Class de.unihalle.informatik.MiToBo.core.dataio.provider.cmdline.MTBDataIOFile.MTBDataIOFileButton extends JPanel implements Serializable

Serialized Fields

button

roiManagerChecker

roiManagerAdd

pathfield

outdata

cl

roisAdded

Package de.unihalle.informatik.MiToBo.core.dataio.provider.swing

Class de.unihalle.informatik.MiToBo.core.dataio.provider.swing.MTBImageDataIOSwing.ImageShowButton extends JButton implements Serializable

Serialized Fields

obj

Class de.unihalle.informatik.MiToBo.core.dataio.provider.swing.MTBImageDataIOSwing.ImageShowPanel extends JPanel implements Serializable

Serialized Fields

button

Class de.unihalle.informatik.MiToBo.core.dataio.provider.swing.MTBJFreeChartDataIOSwing.ChartShowButton extends JButton implements Serializable

Serialized Fields

chart

chartFrame

Class de.unihalle.informatik.MiToBo.core.dataio.provider.swing.MTBJFreeChartDataIOSwing.ChartShowPanel extends JPanel implements Serializable

Serialized Fields

button

Package de.unihalle.informatik.MiToBo.core.dataio.provider.swing.components

Class de.unihalle.informatik.MiToBo.core.dataio.provider.swing.components.MTBTableWindow extends de.unihalle.informatik.Alida.dataio.provider.swing.components.ALDTableWindow implements Serializable

Package de.unihalle.informatik.MiToBo.core.datatypes

Class de.unihalle.informatik.MiToBo.core.datatypes.MTBLineSegment2D extends Line2D.Double implements Serializable

Serialized Fields

width

Class de.unihalle.informatik.MiToBo.core.datatypes.MTBNeuriteSkelGraphException extends Exception implements Serializable

Serialized Fields

error

Class de.unihalle.informatik.MiToBo.core.datatypes.MTBPolygon2DException extends Exception implements Serializable

Serialized Fields

error

Package de.unihalle.informatik.MiToBo.core.exceptions

Class de.unihalle.informatik.MiToBo.core.exceptions.MTBDatatypeException extends MTBException implements Serializable

Serialized Fields

type

Class de.unihalle.informatik.MiToBo.core.exceptions.MTBException extends de.unihalle.informatik.Alida.exceptions.ALDException implements Serializable

Class de.unihalle.informatik.MiToBo.core.exceptions.MTBImageException extends MTBException implements Serializable

Package de.unihalle.informatik.MiToBo.core.grappa

Class de.unihalle.informatik.MiToBo.core.grappa.MTBGrappaFrame extends de.unihalle.informatik.Alida.grappa.ALDGrappaFrame implements Serializable

Class de.unihalle.informatik.MiToBo.core.grappa.MTBGrappaWorkbench extends de.unihalle.informatik.Alida.grappa.ALDGrappaWorkbench implements Serializable

Class de.unihalle.informatik.MiToBo.core.grappa.MTBGrappaWorkbenchTab extends de.unihalle.informatik.Alida.grappa.ALDGrappaWorkbenchTab implements Serializable

Package de.unihalle.informatik.MiToBo.core.gui

Class de.unihalle.informatik.MiToBo.core.gui.MTBChooseOpNameFrame extends de.unihalle.informatik.Alida.gui.ALDChooseOpNameFrame implements Serializable

Serialized Fields

debug

Class de.unihalle.informatik.MiToBo.core.gui.MTBOperatorConfigurationFrame extends de.unihalle.informatik.Alida.gui.ALDOperatorConfigurationFrame implements Serializable

Class de.unihalle.informatik.MiToBo.core.gui.MTBOperatorControlFrame extends de.unihalle.informatik.Alida.gui.ALDOperatorControlFrame implements Serializable

Class de.unihalle.informatik.MiToBo.core.gui.MTBOperatorDocumentationFrame extends de.unihalle.informatik.Alida.gui.ALDOperatorDocumentationFrame implements Serializable

Serialized Fields

opName

opPackage

Package de.unihalle.informatik.MiToBo.core.imageJ

Class de.unihalle.informatik.MiToBo.core.imageJ.ImagePlusInteractionFrame extends JFrame implements Serializable

Serialized Fields

img

canvas

clickedPoints

Class de.unihalle.informatik.MiToBo.core.imageJ.MTBBorder2DSetROI extends ij.gui.Roi implements Serializable